The two-stage bioreactor was designed to examine the combination and separation the
methane oxidation and denitrification processes in an AMO-D system. Methane and oxygen
should be supplied together to promote a mutual effect between methane oxidation and
denitrification processes and enhance the overall efficiency. When methane and oxygen was
supplied separately, the methane concentration in the oxidation column was only 0.033 mg/L,
the removal efficiency was low at 25%. When the two processes were combined in the
Configuration II, more methane and oxygen were utilized; therefore the removal efficiency was
higher. More carbon dioxide was created then lower C/N utilized molar ratio was achieved.
Besides, C/N available ratio should be high enough for the operation of the system. In the
Configuration I, the C/N available was around 2.39 and it might not enough for the combined
process.
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Journal of Science and Technology 54 (4B) (2016) 27-34
COMBINATION OF METHANE OXIDATION AND
DENITRIFICATION PROCESS IN A TWO-STAGE BIOREACTOR
Vu Phuong Thu*, Nga Thi Dinh
Hochiminh City University of Natural resources and Environment, 236B Le Van Sy Street,
Ward 1, Tan Binh District, Ho Chi Minh City
*Email: thu.vuphuong246@gmail.com
Received: 15th August 2016; Accepted for publication: 10th November 2016
ABSTRACT
The importance of a combination of methane oxidation and denitrification processes in a
two-stage bioreactor was investigated for the removal of nitrate using methane gas. In the
configuration I, methane and oxygen were supplied separately to two columns of the two-stage
bioreactor, an oxic column and an anoxic column. The nitrate removal efficiency was around
25 % and nitrite presented in the liquid medium, showing that the denitrification process was not
complete. In the configuration II, methane and oxygen were supplied together to one column of
the two-stage bioreactor, better results were achieved. Nitrate removal efficiency increased to
almost 100 %, no nitrite was found in the liquid medium. The methane oxidation and the
denitrification processes seemed to be happened simultaneously in one column of the two-stage
bioreactor and demonstrated its advantages. Methane utilized concentration in the medium of the
methane oxidation column increased from 1 to 2.1 mg/L, which resulted in more soluble organic
carbon was created and supplied for denitrifiers. The C/N utilized ratio was lower in the
Configuration II showing that the aerobic methane oxidation coupled to denitrification (AMO-
D) achieved higher efficiency when methane and oxygen were supplied together.
Keywords: denitrification, methane oxidation, C/N molar ratio, AMO-D, two-stage bioreactor.
1. INTRODUCTION
Denitrification is an anoxic process and is suppressed in the presence of oxygen [1],
however, it is an unomissible factor in aerobic methane oxidation couple to denitrification
(AMO-D) process, which has been increasingly become an attractive method for denitrification
using methane gas [2]. The AMO-D process must be performed in a two-stage process with
aerobic methanotrophic bacteria producing metabolites, which are used as hydrogen donor by
denitrifier bacteria in anoxic areas [3, 4, 5]. Oxygen is necessary for the oxidation of methane
but it may impact on the efficiency of the denitrification process [6]. The separation of the two
processes may be an applicable solution. Various experiments were carried out with methane
oxidation and denitrification processes simultaneously occurred [7, 8], without considering of
the combination and separation of the two processes. This study focused in a new aspect in the
Vu Phuong Thu, Nga Thi Dinh
28
AMO-D process, an evaluation of the combination and separation of the two processes, methane
oxidation and denitrification.
Two-stage bioreactor which has two columns connecting by a recirculation line was used to
separate the two processes included in the AMO-D process. In this study, each column of the
two-stage bioreactor has its own duty to promote anoxic or oxic condition for the denitrification
or methane oxidation process. Membrane diffuser was used to supply methane and air to the
microbial medium. Packing materials severed as a supporter for the microorganisms to grow and
then the biofilm growing on the surface of packing materials created anoxic condition for the
denitrifiers. The meaning of the combination of methane oxidation and denitrification in the
AMO-D process which occurred in a two-stage bioreactor using packing materials was the
objective of this study.
2. MATERIALS AND METHODS
2.1. Growth medium and culture
The AMO-D culture was originally enriched from an activated sludge sample taken from
an anaerobic digestion reactor in Korea University. Experiments were carried out using a nitrate
minerals salts (NMS) medium of the following chemical composition (mg/L): CaCl2 .2H2O 135;
MgSO4 .7H2O 500; FeSO4.7H2O 9.1; KNO31444. The medium also contained 2 mL/L of
phosphate buffer and 1 mL/L of trace element. The phosphate buffer consisted of (g/L)
Na2HPO410.2 and KH2PO4 24.4. The trace element solution comprised (mg/L): MnCl2 .4H2O
500, FeSO4 .7H2O 2486, ZnSO4 .7H2O 105, NiCl2 .6H2O 91, CoCl2 . 6H2O 50, Na2MoO4 .2H2O
26, H3BO350, CuCl2 .2H2O 212 and 5 mL 35 % HCl.
2.2. Configuration and operation
A two-stage bioreactor was designed with two acrylic columns; the effective volume of
each column was 1litre. Five hollow membrane fibers located at the bottom center of the
bioreactor as membrane diffusers supplying gases to the liquid media. The slits in the membrane
were holes with elastic lids, acting as valves cutting off bubbles from the gas stream. Each fiber
had the outside and inside diameter of 1.65 mm and 0.73 mm, respectively.
In the Configuration I, methane was supplied from a 99.95 % methane cylinder, nitrogen
and air were supplied from pure gas cylinders. The NMS medium inside the reactor was
circulated using a peristaltic pump at different circulation rates of 6 L/h and 18 L/h. In the
Configuration II, only methane and air were supplied to the first column, the NMS medium
inside the reactor was also circulated at circulation rates of 18 and 6 L/h. A half of the medium
in the two-stage bioreactor (500 mL) was replaced every day. Plastic packing materials were
used to support for attached process. Due to biological growth on the surface of the packing
material, an anoxic condition was supposed to be created inside the biofilm. The system was
shown in Figure 1a and 1b.
In the initial acclimation period, methane and nitrogen was supplied to the first column at a
total gas flowrate of 70 mL/min, methane concentration was controlled at 14.7 %, air was
supplied to the second column at the same flowrate of 70 mL/min. Nitrate concentration
increased from 20 to 50 mg NO3-N/L. Following the acclimation period, the operation period
was divided into six steps with different gas flowrates, recirculation rates and nitrate
concentrations. From Steps I to IV, the first configuration was applied. The second configuration
Combination of methane oxidation and denitrification process in a two-stage bioreactor
29
was applied to Steps V and VI. The two-stage bioreactor was operated for 82 days overall and
the operation was described more clearly in Table 1.
Table 1. The operation of the two-stage bioreactor.
Days Step
Gas Liquid
Flowrate at
the 1st
column
(mL/min)
Flowrate
at the 2nd
column
(mL/min)
Methane
conc. (%)
Nitrate
supply as
N(mg/d)
Recircula-
tion rate
(L/h)
System
configura-
tion I
0-12
Acc-
lima-
tion
70(CH4+N2) 70(Air) 14.7 10 6
70 70 14.7 25 6
12-18 I 70 70 14.7 50 6
18-41 II 70 70 14.7 100 6
41-49 III 70 70 14.7 100 18
49-58 IV 70 70 14.7 50 18
System
configura-
tion II
58-73 V
140
(CH4+Air)
0 14.7 50 18
73-82 VI 140 0 14.7 50 6
2.3. Analytical methods
Recirculation
pump
Gas out Gas out
First column Second column
Nitrogen
Methane
Flow meter
Mass flow
controller
Air
Flow meter
(a) System configuration I
Recirculation
pump
Gas out
First column Second column
Air
Methane
Flow meter
Mass flow
controller
(b) System configuration II
Figure 1.Two-stage bioreactor: a) the first configuration where methane and air were supplied
separately; b) the second configuration where methane and air were supplied together.
The liquid samples taken from two columns once in two days were analyzed for dissolved
oxygen concentration, chemical oxygen demand, and optical density at 600 nm. Nitrate and
nitrite concentration was analyzed using an ion chromatography (IC) (Metrohm 792,
Switzerland).
Vu Phuong Thu, Nga Thi Dinh
30
The mixture of gas taken from a gas sampling port located on the top of the reactor
including methane, oxygen, nitrogen and carbon dioxide was collected for gas composition
analysis. Methane concentration was analyzed using an infrared detector (GFM series,
GASDATA, UK) while the carbon dioxide evolved was directly measured using an infrared CO2
analyser (LI-820, LI-COR, USA).
3. RESULTS AND DISCUSSIONS
3.1. Nitrate, nitrite concentration and optical density in the two–stage bioreactor
Figure 2 demonstrates the nitrate, nitrite concentration and optical density in the liquid
medium of the two-stage bioreactor. As mentioned above, there were six steps in the operational
process of the experiment. From Steps I to IV, the gas flowrate supplied to the first column
included methane and nitrogen was 70 mL/min while the methane concentration was maintained
at 14.7 %. Air was supplied to the second column at a flowrate of 70 mL/min, so that the total
gas flowrate was 140 mL/min, yielding a gas retention time (GRT) of 7.1 min.
N
itr
at
e
co
nc
en
tr
at
io
n
as
N
(m
g/
L)
0
50
100
150
200
First column
Second column
Supplied
Acc I II III IV V VI
RR 6 L/h
RR 18 L/h
RR 6 L/h
N
itr
ite
c
on
ce
nt
ra
tio
n
(m
g/
L)
0
2
4
6
8
10
12
14
First configuration
Second configuration
Time (day)
0 20 40 60 80
O
pt
ic
al
d
en
si
ty
(a
bs
)
0.0
0.2
0.4
0.6
0.8
1.0
1.2
1.4
1.6
Figure 2.The nitrate concentration, nitrite concentration and optical density in the two-stage bioreactor.
During the acclimation period, nitrate concentration was almost decreased to zero. In Steps
I and II the nitrate concentration supplied increased stepwise from 50 to 100 and 200 mg NO3-
N/L. The recirculation rate of the medium, between the two columns was set at 6 L/h by a
Combination of methane oxidation and denitrification process in a two-stage bioreactor
31
peristaltic pump. The nitrate concentration measured in the medium increased from 0 mg/L at
the beginning of Step I to 60 mg/L in Step II, it showed that the nitrate removal in the two-stage
bioreactor was not effective. The average removal efficiency in Step II was only 32.2 %. To
enhance the mixing between the two reactors as well as to examine the effect of recirculation
rate in the AMO-D process, the recirculation rate was increased from 6 to 18 L/h in Step III. In
the first column, the mass transfer coefficients for oxygen increased from 0.009 to 0.028 (1/min)
and the mass transfer coefficients for methane increased from 0.001 to 0.024 (1/min). On the
contrary, in the second column, the mass transfer coefficients for oxygen decreased from 0.155
to 0.136 (1/min) and the mass transfer coefficients for methane decreased from 0.134 to 0.117
(1/min). In summary, when the recirculation rate changed, the gases were transferred more
quickly, the mass transfer in one column increased then it decreased in the other column. As the
result, the nitrate concentration in the reactor did not changed substantially. The optical density
was not high and remained around abs 0.8 during the operation of the configuration I.
In the next step, Step IV, the nitrate concentration supplied was decreased to 100 mg/L, so
the nitrate concentration in the medium was decreased too, but the removal efficiency was still
low at 25 %. The C/N molar ratio counted on the amount of methane and nitrate available in the
medium of the bioreactor were 2.20, 2.40 and 2.57 in Steps II, III and IV (Figure 3). They were
calculated as below:
N available (mol/d) = [(N supplied + N remained) x 0.5L] /14 / 1000 (1)
C available (mol/d) = (CH4in – CH4out) (mol CH4-C/d) (2)
C/N available ratio = C available / N available (3)
This number was low in compare with those in previous studies [1,9]. The carbon source
might not enough for the system then the denitrification performance was not good and
microbial density was low.
Time (day)
0 20 40 60 80
C
/N
a
va
ila
bl
e
ra
tio
(m
ol
C
/m
ol
N
)
0
5
10
15
20
25
30
35
40
RR 6 L/h
RR 18 L/h
RR 6 L/h
First configuration Second configuration
Acc I II III IV V VI
Figure 3. The C/N available molar ratio.
In general, the low removal efficiency showed that this bioreactor configuration was not
suitable for aerobic methane oxidation coupled to denitrification. Methane was supplied to the
first column, which was in an anoxic condition, only a small amount of methane dissolved in the
medium, and was transferred to the second column for the methane oxidation process by
Vu Phuong Thu, Nga Thi Dinh
32
recirculation. The amount of dissolved methane transferred to the second column was not
enough to produce the necessary soluble organic compound for the denitrification process.
Therefore, the nitrate removal efficiency was not good, the denitrification process in this step
was not complete, and nitrite (NO2-) ions were found in the medium.
In Step V, the configuration of the two-stage bioreactor was changed, methane and air were
supplied together and the combined gas was supplied directly to the first column. The total gas
flowrate supplied, including methane and air, was 140 mL/min, yielding a gas retention time of
7.1 min. The methane concentration was still remained at 14.7 %. The nitrate concentration in
the two-stage bioreactor decreased dramatically and reached nearly zero after 6 days. The
denitrification in this step was complete, so that no nitrite was found. The C/N available molar
ratio increased to 6.71 and mass transfer coefficient 0.153 (1/min) in the first column. The C/N
ratio was in range of the ratio shown in previous studies, from 2.78 to 12, the carbon available
might be enough for the biological process. Besides, the high removal efficiency was due to the
combination of the two processes, methane oxidation and denitrification, in the two-stage
bioreactor. Methane supplied to the reactor was oxidized directly by methanotrophs, releasing
soluble carbon source which was used by coexisting denitrifiers. This reasonable combination
created a stable operation for the reactor and achieved high nitrate removal efficiency. The
optical density suddenly went up to abs 1.5 at the beginning of the operation of the second
configuration. It showed that the second configuration created convenient condition for the
growth of the bacteria.
It can be said that the configuration of the reactor had an important factor to the process.
Methane and air should be supplied together for high efficiency in the methane oxidation as well
as the denitrification. In Step VI, the recirculation rate was decreased to 6 L/h to examine once
again the effect of the recirculation rate on the AMO-D process. The nitrate concentration in the
two-stage bioreactor in these steps did not change substantially. Besides, the decrease of
recirculation rate made the second column develop an absolute anoxic condition. Some bacteria
decayed, and the biomass concentration was decreased so that the optical density decreased.
In the two last steps, the second configuration was applied, and the denitrification rate
increased dramatically. The denitrification rate reached 2.08 mg NO3-N/L/h as well as almost all
nitrate was removed from the medium. The recirculation rate was changed in Steps III and VI to
determine the affecting factors for this process. The results in Figure 2 showed that the
recirculation rate appeared to be not affecting the AMO-D process. Nitrate removal efficiency
was still good as long as the gas was supplied enough and reasonably.
3.2. C/N utilized molar ratio and carbon dioxide relationship
A C/N utilized molar ratio was calculated based on the molar of methane as C and nitrate
as N, which were used in the two-stage bioreactor. The C/N utilized ratio from Step I to Step VI
was high, the averaged number was 11. It meant the nitrate removal efficiency using methane
gas in the Configuration I was low. With the second configuration, the C/N molar ratio
decreased to 4. The relationship between the C/N molar ratio and the amount of CO2 was
measured in the gas outlet of the bioreactor was described in Figure 4.
As shown in this figure, when the amount of CO2 created was not high, the denitrification
process did not get high efficiency so that the C/N molar ratio was high. When the system was
changed to the second configuration, more CO2 was created and C/N molar ratio decreased.
Methane is not a soluble gas; therefore the mass transfer of methane from the first column
to the second column was the limiting point in the first configuration of the two-stage bioreactor
Combination of methane oxidation and denitrification process in a two-stage bioreactor
33
operation, which resulted in poor performance in the two-stage bioreactor and a high C/N ratio.
Even though, the methane oxidation was good in the first column of the second configuration,
the second column still did not work well, which reduced the total removal efficiency in the
whole system.
CO2-outlet (mol/d)
0.000 0.005 0.010 0.015 0.020 0.025
C
/N
u
til
iz
ed
r
at
io
(m
ol
C
/m
ol
N
)
0
5
10
15
20
25
30
35
40
RR 6 L/h RR 18 L/h RR 6 L/h
Config I Config II
Figure 4. The C/N utilized molar ratio and carbon dioxide relationship.
4. CONCLUSIONS
The two-stage bioreactor was designed to examine the combination and separation the
methane oxidation and denitrification processes in an AMO-D system. Methane and oxygen
should be supplied together to promote a mutual effect between methane oxidation and
denitrification processes and enhance the overall efficiency. When methane and oxygen was
supplied separately, the methane concentration in the oxidation column was only 0.033 mg/L,
the removal efficiency was low at 25%. When the two processes were combined in the
Configuration II, more methane and oxygen were utilized; therefore the removal efficiency was
higher. More carbon dioxide was created then lower C/N utilized molar ratio was achieved.
Besides, C/N available ratio should be high enough for the operation of the system. In the
Configuration I, the C/N available was around 2.39 and it might not enough for the combined
process.
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