By utilization of a four-step procedure, 4-azidomethyl)benzyl thiol was successfully prepared and the conditions of step II (mesylation of alcohol to methylsulfonate) were optimized. This compound bearing both the azide and thiol functionalities was further used to couple with an allyl-functionalized PU foam via the thiol-ene “click” reaction, where the azide group was exploited as a useful labeling group for reaction monitoring by an online FT-IR method. This obtained azide-thiol telechelic functional compound is promising to be used as a linker of macromolecular chains via orthogonal click reactions.
                
              
                                            
                                
            
 
            
                
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Journal of Science and Technology 55 (1B) (2017) 152–159 
SYNTHESIS OF AN AZIDE–THIOL LINKER FOR 
HETEROGENEOUS POLYMER FUNCTIONALIZATION VIA 
THE “CLICK” REACTION 
Thuy Thu Truong1, Ha Tran Nguyen1, 2, * 
1Faculty of Materials Technology, HCMUT–VNUHCM 
268 Ly Thuong Kiet Street, Ward 14, District 10, Ho Chi Minh City, Vietnam 
2Materials Technology Key Laboratory, HCMUT–VNUHCM 
268 Ly Thuong Kiet Street, Ward 14, District 10, Ho Chi Minh City, Vietnam 
*Email: nguyentranha@hcmut.edu.vn 
Received: 30 December 2016; Accepted for publication: 3 March 2017 
ABSTRACT 
In this study, the synthesis of a telechelic linker bearing both azide and thiol functional 
groups was described. The reaction conditions were investigated to optimize the reaction yield. 
The product was analyzed using thin layer chromatography (TLC) and proton nuclear magnetic 
resonance (1H NMR). The employment of the obtained azide–thiol linker in heterogeneous 
polymer “click” functionalization was demonstrated for the first time, which was monitored by 
an online FT–IR method. The obtained telechelic azide–thiol linker is envisioned to be useful 
chemical tools to link macromolecular chains via orthogonal click reactions. 
Keywords: azide, thiol, “click” reaction, polymer functionalization. 
1. INTRODUCTION 
Organic azides are well–known as an important and versatile class of chemical compounds. 
They are considered as powerful precursors for reactive species such as nitrenes, aziridines, 
triazoles, triazolines and many others, as well as can be easily transformed into amines, 
isocyanates and other functional groups [1]. Especially, they have received significantly 
increasing interest as valuable and versatile reagents within the concepts of “click” chemistry. In 
the “click” chemistry aspect, organic azides have assumed an important position at the interface 
between chemistry, biology, medicine, and materials science [1]. 
Click chemistry has become the catchphrase whenever conjugation of different molecules 
to each other is desired [2]. Molecular biologists, and material and polymer chemists have 
rapidly picked up this type of chemistry and adapted it to match their needs in life sciences, 
polymer science and materials science. In many cases, “click” reactions fulfil the aim to join two 
different molecules in an efficient way. This is especially true for macromolecular chemistry, 
where the challenge is to be able to perform click chemistry with polymers, e.g. preparing block 
 cop
[3]
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tow
het
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wi
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atm
dic
olymers by
. Recently, 
luding reac
ween nitrile
pounds [1
ween thiols 
In this stu
ol functiona
plexity of 
link many p
hogonal clic
eriment by 
ker in this r
tance orthog
thiocyanate 
ard macro
erocyclic sy
. Materials 
All chemi
thout furthe
her Chemic
. Synthesis 
An Allyl–
 m–3) based 
allyl loadi
lypropyleneo
lecular weig
er), toluene
mulation, w
m follows a
Figure 
(Chlorom
1 g, 32 mm
osphere fo
hloromethan
 using click–
efforts have
tion of azid
 oxides and
–3]. Other 
and electron
dy, we are i
l groups. I
the macromo
olymer chai
k reactions, 
simultaneou
esearch is e
onal azide–
or thiol–acr
molecular 
nthesis [7]. 
cals were of
r purificatio
als and used
of 4–(azidom
functionaliz
on polyethe
ng of 0.5 
xide–based
ht diol cont
 diisocyana
hich was ca
 previously 
1. Synthetic s
ethyl)benzyl
ol) in 55 m
r 24 h at 8
e was adde
chemistry t
 been made 
e groups w
alkynes and
highly clean
–deficient fu
nterested in 
n this cont
lecular arch
ns together 
where multi
s addition o
nvisioned to
alkyne react
ylate reactio
diversity i
2. MAT
 reagent gra
n. All the s
as received.
ethyl)benz
ed PU foam
r polyols we
mmol.g–1. 
 triols with
aining the al
te, and wa
lculated on 
reported pro
cheme of the 
 alcohol (2.
L of DMF
0 °C. After
d and the so
o link two ch
to the appli
ith substitu
 thermal cli
, fast and 
nctional gro
the synthesi
ext, a parti
itecture by b
[4]. Concep
ple conjuga
f the reagen
 be linker 
ions orthogo
n pathways
n peptide 
ERIALS AN
de quality o
olvents wer
yl alcohol (
 (open cell 
re develope
A mixture 
 molecular
lyl functiona
ter as a ch
the basis o
cedure [8]. 
azide–thiol li
5 g, 16 mm
, and the r
 cooling the
lution was w
Th
emically di
cation of su
ted cyclooc
ck reaction 
efficient me
ups [4]. 
s of a telech
cularly intri
eing able to
tually, it is m
tion reaction
ts [5]. There
useful for m
nally combi
 [6]. Such a
chemistry, 
D METHO
btained from
e of HPLC 
compound 2
structure, 10
d by Rectice
(50/50, w/
 weights o
l group (1,1
emical blo
f the foam d
nker (4–(azid
ol) was add
eaction mix
 reaction to
ashed with 
uy Thu Truo
fferent macr
itable metal–
tynes, 1,3–d
of alkynes w
tal–free rea
elic linker be
guing targe
 combine mu
ore efficien
s could be c
fore, the sy
acromolecu
ned with thi
 telechelic l
combinator
DS 
 Sigma–Ald
grade and w
, Figure 1) 
x10x10 cm,
l NV (Wett
w) of poly
f around 4
,1–trimethyl
wing agent 
ensity. The
omethyl)benz
ed to a solu
ture was st
 room temp
water (3 x 5
ng, Ha Tran
omolecular 
free click r
ipolar cyclo
ith azide–co
ction is the
aring both a
t is to incr
ltiple click 
t and elega
arried out in
nthesized az
lar coupling
ol–maleimid
inker can b
ial chemis
rich (USA) 
ere purcha
 density aro
eren, Belgiu
ethyleneoxi
000 g.mol–
olpropane m
were used
 synthesis o
yl mercaptan
tion of sodiu
irred under 
erature, 10
0 mL) to re
 Nguyen 
153 
segments 
eactions, 
addition 
ntaining 
reaction 
zide and 
ease the 
reactions 
nt to use 
 a single 
ide–thiol 
s via for 
e, thiol–
e applied 
try, and 
and used 
sed from 
und 45.4 
m), with 
de– and 
1, a low 
onoallyl 
 for the 
f the PU 
). 
m azide 
nitrogen 
0 mL of 
move the 
Synthesis of an azide–thiol linker for heterogeneous polymer functionalization via the “click” 
154 
excess NaN3 and DMF. The organic layer was dried over anhydrous MgSO4, and 
dichloromethane was removed using a rotary evaporator to give the product (yield: 90 %). 
2.3. Synthesis of 4–(azidomethyl)benzyl methylsulfonate (compound 3, Figure 1) 
Methanesulfonyl chloride (2 mL, 25.4 mmol) was added dropwise at 0 °C to a solution of 
4–(azidomethyl)benzyl alcohol (compound 2, Figure 1, 2.08 g, 12.7 mmol)) and triethylamine 
(3.6 mL) in tetrahydrofuran (100 mL). The reaction mixture was then stirred at room 
temperature for 2 h. After the reaction, 40 mL of deionized water was added and the mixture was 
extracted with diethylether. The organic layer was washed with 1 N solution of HCl, deionized 
water, saturated NaHCO3 and deionized water, dried over anhydrous MgSO4, and the solvents 
were removed using a rotary evaporator to give the product. The product was purified by column 
chromatography with dichloromethane as eluent (yield: 83%). 
2.4. Synthesis of 4–(azidomethyl)benzyl thioacetate (compound 4, Figure 1) 
Potassium thioacetate (880.6 mg, 7.7 mmol) was added to a solution of 
4–(azidomethyl)benzyl methylsulfonate (compound 3, Figure 1, 0.93 g, 3.8 mmol) in 
tetrahydrofuran (30 mL). The reaction mixture was degassed, refilled with nitrogen gas and 
refluxed for 3 h. The reaction was quenched with brine, extracted with diethyl ether, washed two 
times with brine. The organic layer was dried over anhydrous MgSO4, and the solvents were 
removed using a rotary evaporator to give the product. The product was purified by column 
chromatography with dichloromethane as eluent (yield: 93%). 
2.5. Synthesis of 4–(azidomethyl)benzyl mercaptan (compound 5, Figure 1) 
(Azidomethyl)benzyl thioacetate (compound 4, Figure 1) was refluxed in methanol, in the 
presence of concentrated HCl for 3 h. The reaction was quenched with deionized water and 
extracted with diethyl ether. The organic layer was dried over anhydrous MgSO4, and the 
solvents were removed using a rotary evaporator to give the product (yield: 99 %). 
2.6. Thiol–ene functionalization of the allyl–functionalized PU foam 
Photo–initiation reaction was performed at room temperature, where 4–
(azidomethyl)benzyl mercaptan (compound 5, Figure 1) and 2,2–dimethoxy–2–
phenylacetophenone (DMPA) were used as the thiol compound and UV light initiator, 
respectively. General procedure: in a two–necked glass flask, the allyl–functionalized PU foam 
(about 1x1x1 cm, allyl concentration of 8.75 mM) was charged with the solvent and thiol 
compound. The React–IR silicon probe was dipped in the reaction solution, and a regular stirring 
of the reaction mixture was maintained to avoid bringing bubbles to the surface of the probe. 
After addition of the photoinitiator, the reaction flask was irradiated at room temperature by a 
365 nm UV light (9x9 watt bulbs, intensity of 6 mW.cm–2). The azide conversion was indicated 
by a decrease in absorption intensity of the azide asymmetric stretching vibration at 2200 cm–1. 
The thiol–ene reaction conversion was calculated corresponding to the azide conversion and the 
4–(azidomethyl)benzyl mercaptan to allyl molar ratio used for the reaction. 
Thuy Thu Truong, Ha Tran Nguyen 
155 
2.7. Characterization 
1H NMR spectra were recorded with TMS as an internal reference, on a Bruker Avance 300 
at 300 MHz at Institute of Chemistry–VAST, Ha Noi. Time–resolved online ATR FT–IR spectra 
were recorded on a React–IR 4000 Instrument (Mettler Toledo AutoChem ReactIR) equipped 
with a silicon ATR probe (SiComp, optical range 4400–650 cm–1) at National Key Lab for 
Polymer & Composite (HCMUT–VNUHCM). For online monitoring, the silicon probe was 
introduced into a two–necked glass flask containing the reaction mixture and spectra were 
recorded every 1 min for the first 30 min and then every 2 min. The solvent spectrum was 
recorded at the reaction temperature and subtracted to enhance the signal of the reaction species. 
3. RESULTS AND DISCUSSION 
3.1. Synthesis of 4–(azidomethyl)benzyl mercaptan 
The azide–thiol linker (4–(azidomethyl)benzyl mercaptan) was prepared according to a 
four–step procedure as shown in Figure 1. 
 In the first step, 4–(azidomethyl)benzyl alcohol (compound 2, Figure 1) was prepared from 
4–(chloromethyl)benzyl alcohol (compound 1, Figure 1) by treatment with excess sodium azide 
in dimethylformamide at 80 °C under an inert atmosphere. This applied synthetic route is halide 
displacement by azide ion [9]. In the second step, the hydroxyl group of 4–(azidomethyl)benzyl 
alcohol reacts with methanesulfonyl chloride with triethylamine as the catalyst to transform to 
the methylsulfonate group (step II, Figure 1). The methylsulfonate group of compound 3 was 
then converted in to the thioacetate group via the reaction with potassium thioacetate (step III, 
Figure 1). Finally, the thioacetate group of compound 4 was transformed to the thiol group upon 
reflux in methanol under an acidic condition to yield the final product (compound 5, Figure 1). 
The product of each step was purified by column chromatography. 
Analysis of azide ions using LC–MS was not feasible because of their low molecular 
weight and strong background interference in this range [10]. Therefore, the products were 
analysed by 1H NMR. Figure 2 shows the 1H NMR spectrum of three intermediate products, i.e. 
4–(azidomethyl)benzyl alcohol, 4–(azidomethyl)benzyl methylsulfonate and 
4–(azidomethyl)benzyl thioacetate, and the final product 4–(azidomethyl)benzyl thiol. All the 
peaks in each spectrum could be assigned to the corresponding structures of the products. 
Regarding the synthesis procedure, except for step II, the other three steps resulted in 
products (after purification via column chromatography) in relatively good yields (above 90 %) 
when employing reaction conditions previously reported in the literature [11–13]. However, for 
step II, the yield was low (below 40 %), inspite of the application of conditions previously 
reported for mesylation of the alcohol with methanesulfonyl chloride [14]. For this step, the 
reaction conditions, i.e. the feeding temperature and the reactant molar ratio, were observed to 
influence strongly the reaction yield. 
With the use of methanesulfonyl chloride to 4–(azidomethyl)benzyl alcohol molar ratio of 
2, the reaction yields obtained at two feeding temperatures, 0 °C and room temperature, were 
compared. It was found that the yield was enhanced by approximately two times, from 42 % to 
83 % when methanesulfonyl chloride was added dropwise at the lower temperature (Table 1, 
Entries 1 and 3). It was likely that low temperature suppressed considerably side reactions 
during the formation of the reactive sulfonyl–tertiary amine complex, which, in turn, reacted 
with the alcohol to give the sulfonate. In fact, reaction temperatures of 0–5 °C have also been 
Sy
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R analysis th
nal as an ind
ematic illustr
ication via th
a shows 
l)benzyl th
3D online F
 the reaction
onding plot
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o allyl grou
ck” compou
ynthesis yiel
C) 
Methan
(azidom
e applicatio
ion 
plication of
lization of p
 compound 
a the “click”
A) as photo
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lpropane m
ording to 
onalization d
l compound
ed during th
e reaction s
ication of it
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iol–ene “click
model “c
an FT–IR
iol, DMPA
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 under UV 
 of the amou
hould be no
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esulfonyl chlo
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 the synthes
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 thiol–ene r
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egree can b
 in the react
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olution can 
s concentrat
nthesis of the
” reaction usi
lick” compou
 spectrum
 and the 
fall plot, sho
irradiation fo
nt of model
ted that a bla
performed, i
s absorption
Th
Figure 1) at v
ride to 4–
alcohol molar
ide–thiol lin
ized 4–(azid
aterials, this
led to penda
eaction, in th
er UV irradi
ents (Figure
erdiol in th
y reported 
e performed
ion mixture.
etween the 
be used to c
ion. 
 allyl–functio
ng 4–(azidom
nd in this sud
 of the 
allyl–functio
wing the de
r the thiol c
 compound 
nk reaction 
ndicating no
 on the PU
uy Thu Truo
aried conditio
 ratio 
Yield
purifi
ker in hete
omethyl)ben
 obtained az
nt allyl gro
e presence o
ation. The c
 3) has bee
e feed of t
procedure 
 by monitor
 As the azid
thiol and all
onveniently 
nalized PU fo
ethyl)benzyl 
y. 
reaction 
nalized PU
crease of th
oupling reac
as a function
on a regular
 decrease in
 foam. Clea
ng, Ha Tran
ns. 
 (after column
cation) (%) 
42 
33 
83 
63 
rogeneous 
zyl thiol in 
ide–thiol co
ups of a cro
f 2,2–dimet
ross–linked 
n synthesize
he polycond
[8, 16]. G
ing the conc
e group of th
yl groups, a
monitor the 
am [8], follo
thiol compou
solution co
 foam bef
e characteris
tion to the P
 of reaction
 unfunctiona
 the concent
rly, compar
 Nguyen 
157 
polymer 
a “click” 
mpound 
sslinked 
hoxy–2–
PU foam 
d by the 
ensation 
enerally, 
entration 
e azide–
n in situ 
intensity 
wed by 
nd as a 
ntaining 
ore UV 
tic azide 
U foam, 
 time are 
lized PU 
ration of 
ed to the 
Sy
15
pre
foa
qu
“on
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4–
4–(
pre
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gro
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lin
1
2
3
4
5
nthesis of an
8 
viously pub
ms [8], in 
antification, 
–line” quan
igure 4. Illus
solvent
(azidomethy
azidomethyl)
By utiliz
pared and 
timized. Thi
ple with an
up was exp
thod. This o
ker of macro
. Bräse S.
of a Un
5188–52
. Espeel P
Matchin
. Moses J
Chemica
. Wong C
chemistr
1679–16
. Iha R. K
Applicat
Material
 azide–thiol
lished study
which benz
the employm
tification of
tration of the 
 signal (a) an
l)benzyl thiol
benzyl thiol a
ation of a f
the conditi
s compound
 allyl–functi
loited as a 
btained azid
molecular c
, Gil C., Kne
ique Class o
40. 
., Du Prez
g Recent Pro
. E. and M
l Society Re
. –H., Zimm
y: from Me
95. 
., Wooley 
ions of Ort
s, Chemical 
 linker for he
 on the thio
yl mercaptan
ent of this
 the reaction
FT–IR absorb
d online FT–I
 and the allyl
s a function o
4.
our–step pr
ons of step
 bearing bo
onalized PU
useful label
e–thiol tele
hains via ort
pper K., Zim
f Compoun
 F. E. – “C
gress and U
oorhouse A
views 36 (2
erman S. C.
rrifield to 
K. L., Nyst
hogonal, “C
Reviews 10
terogeneous
l–ene post–
 was used 
 novel azide
. 
ance spectrum
R waterfall p
–functionaliz
f reaction tim
 CONCLU
ocedure, 4–
 II (mesyl
th the azide 
 foam via th
ing group f
chelic functi
hogonal clic
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