3.4.2. Re-docking results of co-crystallized ligand
Re-docking results of galantamine showed that interactions made by re-docked conformations with the active site
were resemble those of the original bound ligand in 1DX6
(Fig. 4). The RMSD values of re-docked conformations
were < 1.5 Å (Table 3) indicated that the molecular model
could be applied to explain the interactions of new ligands
with the active site.
3.4.3. Docking results of chalcone compounds
The docking process was performed successfully with
all 20 chalcone compounds. Docking scores are listed in
Table 4. There was a good correlation between docking
scores and bioactivities of studied chalcone compounds.
This correlation is indicated in Fig. 5.
Among the studied compounds, S17 showed the
strongest interaction with its target. This compound bound
to both catalytic active site and the peripheral anionic site of
AChE. This was similar to chalcone analogs in the studies
of Liu et al [51, 52, 55], but S17 interacted with the different
residues. S17 made 4 interactions with the catalytic site,
including 1 hydrogen bond with Ser200 of the catalytic triad,
2 hydrogen bonds with the “oxyanion” pocket (Gly118
and Gly119), and 1 arene-arene interaction with Phe330
of anionic subsite. Moreover, S17 could make 1 strong
hydrogen bond with the important residue of the peripheral
site Trp121 (Fig. 6). The docking score of S17 is -36.29
kJ.mol-1, which was the most minus value of the chalcone
compounds in the docking process. All of these could give
the explanation for the highest AChE inhibitory activity of
S17 in the studied structures. However, this compound was
less potent than galantamine, and the reason for this could
arise from the fact that galantamine interacted with catalytic
site of AChE more effectively with 2 hydrogen bonds with
catalytic triad and 1 strong hydrogen bond with “oxyanion”
pocket. In addition, a low entropy cost for binding due to
the rigid nature of the galantamine structure which did not
occur with S17 molecule also gave a further explanation.
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MedPharmRes, 2017, 1 15
MedPharmRes
journal of University of Medicine and Pharmacy at Ho Chi Minh City
homepage: and
Original article
Synthesis, in vitro Acetylcholinesterase Inhibitory Activity Evaluation and
Docking Investigation of Some Aromatic Chalcones
Tran Thanh Daoa*, Tran Thai Sonab, Nguyen Thi Cam Vic, Le Minh Tria, and Thai Khac Minha*
aDepartment of Medicinal Chemistry, Faculty of Pharmacy, University of Medicine and Pharmacy at Ho Chi Minh
City, Ho Chi Minh City 700000, Vietnam;
bDepartment of Pharmaceutical Chemistry, Faculty of Pharmacy, College of Medicine and Pharmacy, Hue
University, Hue City 530000, Vietnam;
cTon Duc Thang University, Nguyen Huu Tho St., Tan Phong Ward, Dist. 7, Ho Chi Minh City 70000, Vietnam.
Received August 10, 2017: Accepted September 25, 2017: Published online December 10, 2017
Abstract: In this study, a total of twenty chalcones were synthesized via Claisen-Schmidt condensation reaction
and evaluated for their in vitro acetylcholinesterase inhibitory activities using Ellman’s method. Molecular docking
studies on acetylcholinesterase were performed to elucidate the interactions between these chalcone derivatives and
acetylcholinesterase active site at the molecular level. From the series, six compounds (S1-5 and S17) exhibited
strong acetylcholinesterase inhibitory activities with IC50 values below 100 µM compared to the parent unsubstituted
chalcone. Compound S17 (4’-amino-2-chlorochalcone) showed the strongest acetylcholinesterase inhibitory activity
in the investigated group with IC50 value of 36.10 µM. Molecular modeling studies were consistent with the results of
in vitro acetylcholinesterase inhibitory activities, and chalcone S17 could be considered as a potential lead compound
for the development of new acetylcholinesterase inhibitors.
Key words: acetylcholinesterase, Alzheimer’s disease, chalcone, docking, SAR.
1. INTRODUCTION
Alzheimer’s disease (AD) is a major cause of dementia
in the elderly [1, 2]. This is the ailment of the central nervous
system characterized by the injury of the grey matter in the
cerebral cortex with a complex neurodegenerative process
leading to progressive cognitive decline and memory loss
[3, 4]. Nowadays, millions of people worldwide have
been affected by the disease and the number of patients is
which can improve this situation is an imperative task.
The etiology of AD is currently not fully known, although
factors including the low levels of acetylcholine (ACh),
accumulation of abnormal proteins namely -amyloid ( A)
and -protein, homeostasis irregularity of biometals, and
the pathophysiology of AD [3, 5-7]. At the present time,
clinical therapy for AD patients is primarily established
upon the cholinergic hypothesis which suggests that the
and drugs with ability of inhibiting acetylcholinesterase
(AChE) would control symptoms of the disease [4, 8-10].
Acetylcholinesterase inhibitors (AChEIs) including
rivastigmine, donepezil and galantamine have been
recommended in the treatment of AD for a long period and
they have created the most developed group of drugs for the
disease up to now [4, 10-13]. For the last few years, a vast
number of structures have been tested for acetylcholinesterase
inhibitory activities. The variety of AChEI groups have
provided a plentiful source of materials for in silico
studies (QSAR, docking, pharmacophore). Among these
structures, chalcone has been a group with great concern.
pyrazolines [16], isoxazoles [17], and quinolinylpyrimidines
[18]. There have been a lot of chalcone compounds with a
* Address correspondence to this author at the Department of Medicinal
Chemistry, Faculty of Pharmacy, University of Medicine and Pharmacy
at Ho Chi Minh City, 41 Dinh Tien Hoang street, District 1, Ho Chi
Minh City 700000, Vietnam; E-mails: tranthanhdao@uphcm.edu.vn and
thaikhacminh@uphcm.edu.vn
© 2017 MedPharmRes
16 MedPharmRes, 2017, Vol. 1, No. 1 Tran et al.
diverse array of reported bioactivities such as antimalarial
[19-20], antiprotozoal [21-23], antibacterial [24-27],
antifungal [28-30], antiviral [31-33], antioxidant [34-36],
antitumoral [37-39], and other characteristics such as anti-
Recent studies on the bioactivities of chalcone compounds
have also revealed their abilities in inhibiting enzymes
including urease, -glucosidase [47, 48], lipoxygenase [49,
[56, 57], xanthine oxidase [58], monoamine oxidase (MAO)
[59-61], and -secretase [62, 63]. In addition, it was reported
A
aggregates in vitro, and they could serve as a useful mean
for in vivo imaging of A plaques in Alzheimer’s brain [64].
The studies on bioactivities of chalcone derivatives on the
for the treatment of many diseases including AD.
Computational approaches have become a critical
component of many drug discovery projects, and molecular
docking, which was devised during the early 1980s, has
been a highly active research area in this respect. This is a
method for placing small molecules into the binding site of
their macromolecular targets. The molecular docking can be
utilised to model the interaction between a small molecule
and a protein at the atomic level, which allow to characterize
the behavior of small molecules in the binding site of target
proteins, as well as to elucidate fundamental biochemical
processes or to identify potential bioactive compounds by
virtual screening processes [65].
In this study, a total of 20 chalcone compounds were
synthesized and studied for their in vitro AChE inhibitory
activities. The molecular binding abilities of these
compounds with the enzyme were elucidated by docking
procedure to provide useful information for the design and
synthesis of others with better bioactivities.
2. MATERIALS AND METHODS
2.1. Material and Instruments
All chemicals were obtained from commercial suppliers,
determined on open capillary tubes and are uncorrected
(using Gallenkamp apparatus). IR spectra were recorded on a
Shimadzu FTIR 8201PC instrument. 1H-NMR spectra were
recorded on a Bruker (500 MHz) spectrometer. Chemical
relative to tetramethylsilane as an internal standard. Peak
splitting patterns were abbreviated as m (multiplet), s
(singlet), bs (broad singlet), d (doublet), bd (broad doublet),
t (triplet) and dd (doublet of doublets).
2.2. Chemistry
Claisen-Schmidt condensation reaction [66] was ap-
plied to synthesize chalcones (Fig. 1). The reaction of
acetophenone and benzaldehyde derivatives in KOH/
of concentrated HCl provided S1-S20 with satisfactory
yields after re-crystallized from appropriate solvents. The
by IR and 1H-NMR spectra.
General procedures for the preparation of chalcone
compounds S1-S20
Acetophenone and benzaldehyde derivatives (with
proportion of 1:1) were dissolved in methanol with stirring.
Potassium hydroxide was then added. The resulting
solution was stirred at room temperature or cooled by ice as
needed. The chemical reaction was monitored by thin layer
crystallized from appropriate solvents to give the product.
2.3. Acetylcholinesterase inhibitory activity assay
AChE inhibitory activities of chalcones were
determined by Ellman’s [67] colourimetric method using
and acetylthiocholine iodide (ATCI) as a substrate and
galantamine as a reference. The assay was performed
in 96-well microtiter plates in the same condition for
both chalcones and control substance. 25 µL of 100 mM
sodium phosphate buffer pH 8, 25 µL of sample and 25 µL
acetylcholinesterase solution containing 0.54 U/mL were
mixed in each well of the plate and allowed to incubate
for 15 min at 25 °C. Subsequently, 25 µL of a solution of
ATCI (15 mM, dissolved in water) and 125 µL of 3 mM
DTNB (5,5’-dithio-bis-nitro benzoic acid) were added. The
reaction. A control reaction which was considered to have
100% activity was carried out using the same volume of
methanol/water instead of tested solutions. All samples were
assayed in triplicate. Percentages (%) of AChE inhibitions
of tested compounds were calculated from the absorbance
values as indicated in equation (1):
% I = [(A0E – A0) – (Ac – A0C)]/(A0E – A0) (1)
Where I is the percent inhibition of acetylcholinesterase;
A0E is the absorbance value of the control blank sample
with enzyme; A0 is the absorbance value of blank sample;
Ac is the absorbance value of the tested sample; A0C is the
absorbance value of blank test sample.
O
R'3R'2
R'1
R1
R2
R3
R4
CH3
O
R'3R'2
R'1
R1
R2
R3
R4
O
H
A B A B
1. KOH, MeOH
2. c-HCl
+
substituted
acetophenone
substituted
benzaldehyde
substituted
chalcone
Fig. 1. Claisen-Schmidt condensation reaction in chalcones synthesis
17Synthesis, In vitro Acetylcholinesterase Inhibitory Activity MedPharmRes, 2017, Vol. 1, No. 1
Table 1. The content of each sample in in vitro assay
Samples ATCI DTNB Buffer Chalcone AChE
Control blank sample with enzyme (A0E) + + + - +
Blank sample (A0) + + + - -
Tested sample (AC) + + + + +
Blank test sample (A0C) + + + + -
+: present; -: absent
The content of each sample is indicated in Table 1.
Linear recurrent equations indicating the correlation
between common logarithm of the concentrations of
investigated compounds (µM) and their percentages of
AChE inhibition (%) were built, and from which the IC50
values (concentration that inhibits 50% AChE activity) of
studied chalcones were then extrapolated.
2.4. Kinetic characterization of AChE inhibition
The most active compound against AChE was selected
for further kinetic investigation. Tested compound was
added into the assay solution and pre-incubated with the
enzyme at 25 °C for 15 minutes, followed by the addition of
different concentrations (5, 10, 20, 30, 40 mM) of substrate
(ATCI) mixed in the phosphate buffer (pH 8.0), DTNB (3
mM), AChE (0.54 U/mL) and studied compound (30, 40
M). Kinetic characterization of the hydrolysis of ATCI
catalyzed by AChE was done spectrometrically at 405 nm.
A parallel control with no inhibitor in the mixture, allowed
adjusting activities to be measured at various times.
2.5. Molecular Docking Study
The Protein Data Bank crystallographic structure of
TcAChE(-)-Galantamine complex (pdb 1DX6) [68] was
used as receptor model in this study. The 3D structure of
the crystallographic complex was rendered by means of
the important amino acid residues enclosed within a radius
sphere of 6.5 Å centered by the bound ligand, galantamine.
All unbound water molecules were eliminated and the
structures of amino acid residues were checked before re-
establishing the active site of the enzyme.
The 2D and 3D chemical structures of 20 chalcones
structures of molecules were optimized by the energy
minimization and molecular dynamic modules in SYBYL-X
2.0 [71]. In the energy minimization process, Conj Grad
method was chosen and the structures of molecules were
optimized until converged to a minimum energy change
of 0.00001 kcal.mol-1. Gasteiger-Huckel charges were
assigned to the structure atoms and the maximum number
of iterations to perform during minimization was set to
10,000. Molecular dynamic process was proceeded to
obtain conformations with the minimum global energies.
The method used in this process was Simulated Annealing.
In this method, the molecules were heated at 700 K in a
period of 1,000 femtoseconds, they were then cooled down
to 200 K in another period of 1,000 femtoseconds to give
out different necessary structures. Finally, the energy
minimization process was performed one more time and the
co-crystallized ligand, including: one separated from the
complex (native form, not prepared), one separated from
the complex and re-prepared using mentioned appropriate
procedure, and one built and prepared from the beginning.
The RMSD value between re-docked conformation and the
original bound ligand in the co-crystal complex which was
prediction of new ligands. Docking process was performed
using FlexX program in BioSolveIT LeadIt. This program
protein was kept rigid during docking process. FlexX used
an incremental construction algorithm for the seach of ligand
active site by matching interaction geometries between
the ligand and protein. Then the remains were gradually
utilised empirical scoring functions to score and rank the
docking poses [65, 73]. In this study, the docking process
was done with following options: The method in which base
fragment placed in binding pocket was Triangle Matching;
the maximum number of solutions per iteration was set to
1,000; the maximum number of solutions per fragmentation
was set to 200; the number of poses to keep for further
analysis of interaction was set to 10. The best conformation
was the one with the most minus docking score. This score
was the total energy emitted from the formation of binding
between the molecules and the active site.
The interactions between chalcone molecules and
their target were rendered and analyzed in MOE 2008.10
program [74] (hydrogen bonds, - interactions, cation-
interactions, ionic interactions). Van der Waals surface
interactions were detected by the contact of hydrophilic
and lipophilic surfaces of the ligands with those of binding
points.
18
3. RESULTS AND DISCUSSION
3.1. Chemistry
(E)-2-Chloro-2’-hydroxychalcone (S1)
Yield: 68%. M.p: 155±1o -1, KBr): 1641
C=O C=C C=Cl). 1H-NMR (500
MHz, CDCl3
J = 15.5 Hz, H ); 7.95-7.93 (d, 1H, J1 = 8 Hz, J2 = 1.5 Hz,
H6’); 7.81-7.79 (dd, 1H, J = 8 Hz, H3’); 7.69-7.66 (d, 1H,
J = 15.5 Hz, H ); 7.56-7.53 (t, 1H, H5’); 7.50-7.49 (d, 1H,
J1 = 7.5 Hz, J2 = 1 Hz, H6); 7.41-7.35 (m, 2H, H5 and H4’);
7.08-7.06 (dd, 1H, J1 = 8.5 Hz, J2 = 1 Hz, H3); 6.99-6.96
(t, 1H, H4).
(E)-4-Chloro-2’-hydroxychalcone (S2)
Yield: 74%. M.p: 152±1o -1, KBr): 1639
C=O C=C C=Cl). 1H-NMR (500
MHz, CDCl3
J = 8 Hz, H6’); 7.93-7.88 (d, 1H, J = 15.5 Hz, H ); 7.67-7.64
(d, 1H, J = 15.5 Hz, H ); 7.64-7.62 (d, 2H, J = 9 Hz, H2 and
H6); 7.56-7.52 (t, 1H, H4’); 7.45-7.44 (d, 2H, J = 8.5 Hz, H3
and H5); 7.08-7.06 (d, 1H, J = 8.5 Hz, H3’); 7.00-6.97 (t,
1H, H5’).
(E)-2,4-Dichloro-2’-hydroxychalcone (S3)
Yield: 74%. M.p: 178±1o -1, KBr): 1641
C=O C=C C=Cl). 1H-NMR (500
MHz, CDCl3
J = 15.5 Hz, H ); 7.92-7.90 (dd, 1H, J1 = 8 Hz, J2 = 1.5 Hz,
H6’); 7.74-7.72 (d, 1H, J = 7.5 Hz, H6); 7.66-7.63 (d, 1H, J
= 15.5 Hz, H ); 7.56-7.53 (t, 1H, J1 = 7 Hz, J2 = 2 Hz, H5’);
7.52 (s, 1H, J = 2 Hz, H3); 7.36-7.34 (dd, 1H, J1 = 9 Hz, J2
= 2 Hz, H5); 7.08-7.06 (d, 1H, J = 7.5 Hz, H3’); 6.99-6.98 (t,
1H, H4’).
(E)-2,3-Dichloro-2’-hydroxychalcone (S4)
Yield: 67%. M.p: 185±1 o -1, KBr): 1684
C=O C=C C=Cl). 1H-NMR (500
MHz, CDCl3
J = 16 Hz, H ); 7.92-7.91 (d, 1H, J1 = 8.5 Hz, J2 = 1 Hz,
H6’); 7.70-7.68 (d, 1H, J1 = 8 Hz, J2 = 1.5 Hz, H4); 7.65-7.62
(d, 1H, J = 15.5 Hz, H ); 7.57-7.55 (dd, 1H, J1 = 8 Hz, J2
= 1.5 Hz, H6); 7.57-7.53 (t, 1H, H5’); 7.33-7.29 (t, 1H, H4’);
7.08-7.06 (dd, 1H, J1 = 8 Hz, J2 = 1 Hz, H3’); 7.00-6.96 (t,
1H, H5).
(E)-2’-Hydroxy-2,4-dimethoxychalcone (S5)
Yield: 71%. M.p: 113±1oC. IR ( cm-1, KBr): 1638 ( C=O),
1558 ( C=C aromatic ring), 1171 ( C-O). 1H-NMR (500 MHz,
MeOD, ppm): 8.20-8.18 (d, 1H, J = 15.5 Hz, H ); 8.06-
8.04 (d, 1H, J = 8 Hz, H6’); 7.81-7.78 (d, 1H, J = 15.5, H );
7.75-7.73 (d, 1H, J = 9.5 Hz, H3’); 7.51-7.47 (m, 1H, H5’);
6.98-6.95 (m, 1H, H4’); 6.95-6.93 (d, 1H, J = 8 Hz, H6);
6.62-6.60 (ds, 2H, J = 7.5 Hz, H3 and H5); 3.94 (s, 3H, Ar-
-OCH3); 3.86 (s, 3H, Ar-OCH3).
(E)-2’-Hydroxy-2,3-dimethoxychalcone (S6)
Yield: 48%. M.p: 107±1oC. IR ( cm-1, KBr): 3279 ( O-H),
1639 ( C=O), 1607 ( C=C aromatic ring), 1117 ( C-O). 1H-NMR
(500 MHz, CDCl3, ppm): 12.83 (s, 1H, -OH phenol); 8.22-
8.18 (d, 1H, J = 15.5 Hz, H ); 7.92-7.91 (d, 1H, J = 1.5 Hz,
8 Hz, H6’); 7.77-7.74 (d, J = 15.5, 1H, H ); 7.51-7.48 (t, 1H,
H4’); 7.29-7.27 (d, 1H, J1 = 1 Hz, J2 = 8 Hz, H6); 7.12-7.09 (t,
1H, H5); 7.04-7.02 (d, 1H, J1 = 1 Hz, J2 = 8 Hz, H6); 7.00-6.99
(d, 1H, J1 = 1 Hz, J2 = 8 Hz, H3’); 3.92 (s, 3H, -OCH3); 3.90
(s, 3H, -OCH3).
(E)-2’-Hydroxy-3,4,5-trimethoxychalcone (S7)
Yield: 67%. M.p: 157±1 oC. IR ( cm-1, KBr): 1636
( C=O); 1568 ( C=C aromatic ring), 1155 ( C-O). 1H-NMR
J = 8 Hz, H6’);
7.90 (s, 2H, 15 Hz, H and H ), 7.57-7.54 (t, 1H, J = 7.5 Hz,
H5’), 7.16 (s, 2H, H2 and H6), 7.04-7.00 (t, 1H, J = 7.5 Hz,
H4’); 7.02-7.00 (d, 1H, J = 9.5 Hz, H3’); 3.95 (s, 6H, Ar-O-
CH3); 3.85 (s, 3H, Ar-OCH3).
(E)-2’-Hydroxy-4-dimethylaminochalcone (S8)
Yield: 87%. M.p: 180±1 oC. IR ( cm-1, KBr): 1622
( C=O), 1599 ( C=C aromatic ring), 1155 ( C-O). 1H-NMR
(500 MHz, CDCl3, ppm): 13.17 (s, 1H, -OH phenol); 7.93-
7.90 (d, 1H, J = 15.5 Hz, H ); 7.93-7.91 (d, 1H, J1 = 1.5 Hz,
J2 = 7.5 Hz, H6); 7.58-7.56 (d, 2H, J = 8 Hz, H2’ and H6’);
7.47-7.44 (d, 1H, J = 15 Hz, H ); 7.47-7.44 (t, 1H, H4); 7.02-
7.00 (d, 1H, J = 8 Hz, H3); 6.94-6.90 (t, 1H, H4’); 6.71-6.69
(d, 2H, J1 = 2 Hz, J2 = 8 Hz, H3 and H5); 3.06 (s, 6H, -CH3).
(E)-2’-Hydroxy-2,3,4’-trimethoxychalcone (S9)
Yield: 58%. M.p: 133±1 oC. IR ( cm-1, KBr): 1638
( C=O), 1582 ( C=C aromatic ring), 1269 ( C-O). 1H-NMR
(500 MHz, CDCl3, ppm): 13.44 (s, 1H, -OH phenol); 8.17-
8.14 (d, 1H, J = 15,5 Hz, H ); 7.83-7.81 (d, 1H, J1 = 2 Hz, J2
= 9 Hz, H6’); 7.68-7.65 (d, 1H, J = 16 Hz, H ); 7.27-7.26 (d,
1H, J1 = 1.5 Hz, J2 = 8 Hz, H6); 7.11-7.08 (t, 1H, J = 8 Hz,
H5); 7.00-6.97 (d, 1H, J1 = 1,5 Hz, J2 = 8 Hz, H5’); 6.49-6.48
(d, 1H, J1 = 2.5 Hz, J2 = 8 Hz, H3); 6.47 (s, 1H, H3’); 3.91
(s, 3H, -OCH3), 3.90 (s, 3H, -OCH3); 3.86 (s, 3H, -OCH3).
(E)-2’-Hydroxy-3,4,4’-trimethoxychalcone (S10)
Yield: 62%. M.p: 170±1 oC. IR ( cm-1, KBr): 1634 ( C=O),
1565 ( C=C aromatic ring), 1126 ( C-O). 1H-NMR (500 MHz,
CDCl3, ppm): 13.50 (s, 1H, -OH phenol); 7.86-7.82 (d, 1H, J
= 15.5 Hz, H ); 7.84-7.82 (d, 1H, J = 8 Hz, H6’); 7.44-7.41 (d,
1H, J = 15.5 Hz, H ); 7.26-7.24 (d, 1H, J1 = 2 Hz, J2 = 8.5 Hz,
H6); 7.16 (d, 1H, J = 2 Hz, H3’); 6.91-6.90 (d, 1H, J = 8 Hz, H5);
6.50-6.47 (d, 1H, J1 = 2.5 Hz, J2 = 8.5 Hz, H5’); 6.47 (s, 1H, J
= 2 Hz, H2); 3.96 (s, 3H, -OCH3); 3.93 (s, 3H, -OCH3), 3.86 (s,
3H, -OCH3).
(E)-2’-Hydroxy-3,4,4’,5-tetramethoxychalcone (S11)
Yield: 63%. M.p: 123±1 oC. IR ( cm-1, KBr): 1643
( C=O), 1574 ( C=C aromatic ring), 1202 ( C-O). 1H-NMR
(500 MHz, CDCl3, ppm): 13.43 (s, 1H, -OH phenol); 7.84-
MedPharmRes, 2017, Vol. 1, No. 1 Tran et al.
19Synthesis, In vitro Acetylcholinesterase Inhibitory Activity MedPharmRes, 2017, Vol. 1, No. 1
7.82 (d, 1H, J1 = 2 Hz, J2 = 9 Hz, H6’); 7.82-7.78 (d, 1H, J =
16 Hz, H ); 7.46-7.43 (d, 1H, J = 16 Hz, H ); 6.87 (s, 2H, H2
and H6); 6.50-6.48 (d, 1H, J1 = 2.5Hz, J2 = 9 Hz, H5); 6.48
(s, 1H, H3); 3.93 (s, 6H, -OCH3 x 2); 3.91 (s, 3H, -OCH3),
3.86 (s, 3H, -OCH3).
(E)-4-Chloro-2’-hydroxy-4’-methoxychalcone (S12)
Yield: 68%. M.p: 143±1 oC. IR ( cm-1, KBr): 1635
( C=O), 1566 ( C=C aromatic ring), 1204 ( C-O). 1H-NMR
(500 MHz, CDCl3, ppm): 13.33 (s, 1H, -OH phenol); 7.84-
7.80 (d, 1H, J = 15.5 Hz, H ); 7.81-7.79 (d, 1H, J = 8.5 Hz,
H6); 7.58-7.56 (d, 2H, J1 = 2 Hz, J2 = 8.5 Hz, H2’ and H6’);
7.55-7.52 (d, 1H, J = 15.5 Hz, H ); 7.41-7.39 (d, 2H, J1 =
2.5 Hz, J2 = 8.5 Hz, H3’ and H5’); 6.50-6.47 (d, 1H, J1 = 2,5
Hz, J2 = 8,5 Hz, H5); 6.48 (s, 1H, H3); 3.86 (s, 3H, -OCH3).
(E)-2’-Hydroxy-2,4,4’,6’-tetramethoxychalcone (S13)
Yield: 55%. M.p: 132±1 oC. IR ( cm-1, KBr): 1549
( C=O), 1504 ( C=C aromatic ring), 1119 ( C-O). 1H-NMR
13.79 (s, 1H, -OH phenol);
7.91-7.88 (d, 1H, J = 15.5 Hz, H ); 7.80-7.77 (d, 1H, J = 16
Hz, H ); 7.65-7.63 (d, 1H, J = 8.5 Hz, H6); 6.65 (d, 1H, J =
2 Hz, H3); 6.63- 6.61 (dd, 1H, J1 = 2,5 Hz, J2 = 8.5 Hz, H5);
6.14 (d, 1H, J = 2 Hz, H3’); 6.11 (d, 1H, J = 2 Hz, H5’); 3.90
(s, 6H, -OCH3); 3.84 (s, 3H, -OCH3); 3.82 (s, 3H, -OCH3).
(E)-2’-Hydroxy-3,4,4’,6’-tetramethoxychalcone (S14)
Yield: 66%. M.p: 130±1 oC. IR ( cm-1, KBr): 1622
( C=O), 1549 ( C=C aromatic ring), 1304 ( C-O). 1H-NMR
7.67-7.63 (d, 1H, J = 15.5 Hz, H ); 7.62-7.59 (d, 1H, J =
15.5 Hz, H ); 7.30-7.28 (dd, 2H, J1 = 7 Hz, J2 = 2 Hz, H2
and H6); 7.03-7.02 (d, 1H, J = 8.5 Hz, H5); 6.16-6.15 (d, 1H,
J = 2.5 Hz, H3’); 6.12 (d, 1H, J = 2.5 Hz, H5’); 3.89 (s, 3H,
-OCH3); 3.83 (s, 3H, -OCH3); 3.82 (s, 6H, -OCH3).
(E)-2’-Hydroxy-2,3,4,4’,6’-pentamethoxychalcone (S15)
Yield: 72%. M.p: 134±1 oC. IR ( cm-1, KBr): 1638
( C=O), 1593 ( C=C aromatic ring), 1113 ( C-O). 1H-NMR
7.82-7.78 (d, 1H, J = 16 Hz, H ); 7.76-7.73 (d, 1H, J =
15.5 Hz, H ); 7.50 (d, 1H, J = 8.5 Hz, H6); 6.92-6.91 (d,
1H, J = 9 Hz, H5); 6.16-6.15 (d, 1H, J = 2.5 Hz, H3’); 6.12
(d, 1H, J = 2.5 Hz, H5’); 3.89 (s, 3H, -OCH3); 3.86 (s, 3H,
-OCH3); 3.85 (s, 3H, -OCH3); 3.82 (s, 3H, -OCH3); 3.78
(s, 3H, -OCH3).
(E)-4-Chloro-2’-hydroxy-4’,6’-dimethoxychalcone (S16)
Yield: 69%. M.p: 138±1 oC. IR ( cm-1, KBr): 1630
( C=O), 1568 ( C=C aromatic ring), 1290 ( C-O). 1H-NMR
7.77-7.73 (t, 3H, J1 = 8.5 Hz, J2 = 7.5 Hz, J3 = 16 Hz, H ,
H3, H4); 7.64-7.61 (d, 1H, J = 16 Hz, H ); 7.52-7.50 (d, 2H,
J = 8.5 Hz, H2 and H5); 6.17-6.16 (d, 1H, J = 2 Hz, H3’);
6.14-6.13 (d, 1H, J = 2.5 Hz, H5’); 3.90 (s, 3H, -OCH3);
3.83 (s, 3H, -OCH3).
(E)-4’-Amino-2-chlorochalcone (S17)
Yield: 66%. M.p: 135±1 o -1 NH2);
C=O C=C C-Cl). 1H-NMR
(500 MHz, CDCl3 J = 8.5 Hz, H3);
7.96-7.94 (d, 2H, J1 = 9 Hz, J2 = 2 Hz, H2’ and H6’); 7.77-7.75
(m, 1H, H5); 7.57-7.54 (d, 1H, J = 15.5 Hz, H ); 7.53-7.46 (m,
1H, H4); 7.46-7.44 (d, 1H, J = 8 Hz, H6); 7.34-7.31 (d, 1H, J =
15.5 Hz, H ); 6.73-6.71 (dd, 2H, J1 = 7 Hz, J2 = 2 Hz, H3’ and
H5’); 4.23 (s, 2H, -NH2).
(E)-4’-Amino-4-chlorochalcone (S18)
Yield: 70%. M.p: 114±1 o -1 NH2);
C=O C=C C -Cl). 1H-NMR
(500 MHz, CDCl3 J1 = 7 Hz, J2
= 2 Hz, H2’ and H6’); 7.76-7.73 (d, 1H, J = 15.5 Hz, H ); 7.59
(dd, 2H, J1 = 6.5 Hz, J2 = 1.5 Hz, H3’ and H5’); 7.55-7.52 (dd,
1H, J = 15.5 Hz, H ); 7.61-7.52 (d, 2H, J1 = 7 Hz, J2 = 2 Hz,
H2 and H6); 7.41-7.39 (dd, 2H, J1 = 7 Hz, J2 = 2 Hz, H3 and
H5); 4.17 (s, 2H, -NH2).
(E)-4’-Amino-4-nitrochalcone (S19)
Yield: 76%. M.p: 174±1o -1, KBr): 3489
NH2 C = O C=C aromatic ring). 1H-NMR
J = 9 Hz, H3
and H5); 8.13-8.12 (d, 2H, J = 8.5 Hz, H2 and H6); 8.08-8.05
(d, 1H, J = 15.5 Hz, H ); 7.96-7.95 (d, 2H, J = 8.5 Hz, H2’
and H6’); 7.70-7.67 (d, 1H, J = 15.5 Hz, H ); 6.64-6.62 (d,
2H, J = 9 Hz, H3’ and H5’); 6.24 (s, 2H, -NH2).
(E)-3’,4-Dinitrochalcone (S20)
Yield: 60%. M.p: 185±1 o -1 C=O);
C=C aromatic ring). 1
8.88-8.87 (m, 1H, H4’); 8.64-8.62 (d, 1H, H6’); 8.54-8.52 (m, 1H,
H2’); 8.32-8.30 (d, 2H, J = 7.5 Hz, H3 and H5); 8.24 (d, 2H, J = 8,
H2 and H6); 8.22-8.21 (d, 1H, J = 15.5, H ), 7.94-7.92 (d,1H, J =
16 Hz, H ), 7.91-7.89 (d, 1H, H5’).
3.2. In vitro Assay
Inhibitory activities against AChE of the chalcone de-
rivatives S1-S20 were determined by the Ellman’s method,
with galantamine as a reference compound. The IC50 val-
ues for AChE inhibition are indicated in Table 2. Results of
AChE inhibitory assay showed that in comparision with the
control substance galantamine, synthesized chalcone com-
pounds had weaker activities. And based on their activities,
they could be divided into 3 groups: those with strong ac-
tivities including S1, S2, S3, S4, S5, S17 whose IC50 values
were from 36.10 µM (S17) to 92.42 µM (S1), those with
average activities including S9, S10, S16 whose IC50 values
were from 129.90 (S10) to 213.14 (S16), and the rest with
weak activities. The results also indicated that the derivative
S17 was the most potent compound.
20
Table 2. Acetylcholinesterase inhibitory activities of studied chalcone compounds
O
R'3R'2
R'1
R1
R2
R3
R4
Compounds
A-ring B-ring IC50
R’1 R’2 R’3 R1 R2 R3 R4 (µg/ml) (µM) r2*
S1 OH H H Cl H H H 23.81 92.42 0.97
S2 OH H H H H Cl H 13.62 52.71 0.93
S3 OH H H Cl H Cl H 14.91 51.01 0.89
S4 OH H H Cl Cl H H 18.32 62.37 0.85
S5 OH H H OMe H OMe H 24.63 86.45 0.84
S6 OH H H OMe OMe H H > 100 ND ND
S7 OH H H H OMe OMe OMe > 100 ND ND
S8 OH H H H H N(Me)2 H > 100 ND ND
S9 OH OMe H OMe OMe H H 60.12 190.98 0.90
S10 OH OMe H H OMe OMe H 40.80 129.90 0.99
S11 OH OMe H H OMe OMe OMe > 100 > 250 ND
S12 OH OMe H H H Cl H > 100 > 250 ND
S13 OH OMe OMe OMe H OMe H > 100 > 250 ND
S14 OH OMe OMe H OMe OMe H > 100 > 250 ND
S15 OH OMe OMe OMe OMe OMe H > 100 > 250 ND
S16 OH OMe OMe H H Cl H 67.88 213.14 0.95
S17 H NH2 H Cl H H H 9.32 36.10 0.88
S18 H NH2 H H H Cl H > 100 > 250 ND
S19 H NH2 H H H NO2 H > 100 > 250 ND
S20 H NO2 H H H N(Me)2 H > 100 > 250 ND
Chalcone H H H H H H H > 100 > 250 ND
Galantamine** 1.36 0.4 0.93
between common logarithm of the concentrations of investigated
compounds (µM) and their percentages of AChE inhibition (%); **: used as control substance; ND: Not detected
3.3. Enzyme Kinetics
The Lineweaver-Burk plots (Fig. 2) describing the
AChE inhibition by S17 showed both increasing slopes and
increasing intercepts with higher inhibitor concentrations.
This pattern indicated a mixed-type inhibition of enzyme
and it was in agreement with the results of studies carried
out by Liu et al [51, 52, 55] on the chalcone analogs of S17.
These results also revealed that compound S17 and the an-
alogs bound to both catalytic active site and the peripheral
anionic site of AChE, which was elucidated by molecular
modeling studies.
3.4. Molecular Simulation
3.4.1. Binding mode of galantamine in crystallographic
structure of TcAChE(-)-Galantamine complex (pdb 1DX6)
The rather tight binding of galantamine to TcAChE
came from many interactions with the protein. The model
of interaction between galantamine and its target (Fig. 3)
indicated that this compound could make 3 interaction with
the catalytic site, including 2 hydrogen bonds with Ser220
and His440 of the catalytic triad, 1 strong hydrogen bond
between the hydroxyl group with Glu199 of the ‘anionic’
subsite with the distance of about 1.5 Å. In addion there was
one arene-cation interaction between galantamine and res-
idue Phe330 of the ‘anionic’ subsite in the enzyme’s active
site. These were important bonds which contributed to the
potent activity of galantamine and could be considered in
the interactions of studied chalcones.
MedPharmRes, 2017, Vol. 1, No. 1 Tran et al.
21Synthesis, In vitro Acetylcholinesterase Inhibitory Activity MedPharmRes, 2017, Vol. 1, No. 1
22
Table 4. Docking scores of studied chalcone compounds
Compound Score (kJ.mol-1) pIC50 Compound Score (kJ.mol-1) pIC50
S1 -27.33 4.03 S11 -19.41 3.13
S2 -34.46 4.28 S12 -19.41 3.05
S3 -29.98 4.29 S13 -20.27 3.46
S4 -23.47 4.21 S14 -15.40 3.14
S5 -26.43 4.06 S15 -18.37 3.20
S6 -16.50 2.86 S16 -20.54 3.67
S7 -17.50 2.85 S17 -36.29 4.44
S8 -18.30 3.13 S18 -14.53 3.23
S9 -24.28 3.72 S19 -19.41 3.25
S10 -25.90 3.89 S20 -23.55 3.16
Galantamine -31.47 5.87
MedPharmRes, 2017, Vol. 1, No. 1 Tran et al.
Table 3. Results of re-docking processes with co-crystallized
ligands
Ligand RMSD (Å)
1 0.4912
2 0.5184
3 0.5021
- Ligand 1: separated from the complex (native form, not
prepared).
- Ligand 2: separated from the complex and re-prepared using
mentioned appropriate procedure.
- Ligand 3: built and prepared from the beginning.
3.4.2. Re-docking results of co-crystallized ligand
Re-docking results of galantamine showed that interac-
tions made by re-docked conformations with the active site
were resemble those of the original bound ligand in 1DX6
(Fig. 4). The RMSD values of re-docked conformations
were < 1.5 Å (Table 3) indicated that the molecular model
could be applied to explain the interactions of new ligands
with the active site.
3.4.3. Docking results of chalcone compounds
The docking process was performed successfully with
all 20 chalcone compounds. Docking scores are listed in
Table 4. There was a good correlation between docking
scores and bioactivities of studied chalcone compounds.
This correlation is indicated in Fig. 5.
Among the studied compounds, S17 showed the
strongest interaction with its target. This compound bound
to both catalytic active site and the peripheral anionic site of
AChE. This was similar to chalcone analogs in the studies
of Liu et al [51, 52, 55], but S17 interacted with the different
residues. S17 made 4 interactions with the catalytic site,
including 1 hydrogen bond with Ser200 of the catalytic triad,
2 hydrogen bonds with the “oxyanion” pocket (Gly118
and Gly119), and 1 arene-arene interaction with Phe330
of anionic subsite. Moreover, S17 could make 1 strong
hydrogen bond with the important residue of the peripheral
site Trp121 (Fig. 6). The docking score of S17 is -36.29
kJ.mol-1, which was the most minus value of the chalcone
compounds in the docking process. All of these could give
the explanation for the highest AChE inhibitory activity of
S17 in the studied structures. However, this compound was
less potent than galantamine, and the reason for this could
arise from the fact that galantamine interacted with catalytic
site of AChE more effectively with 2 hydrogen bonds with
catalytic triad and 1 strong hydrogen bond with “oxyanion”
pocket. In addition, a low entropy cost for binding due to
the rigid nature of the galantamine structure which did not
occur with S17 molecule also gave a further explanation.
Fig. 5. The correlation between docking scores and bioactivities of studied chalcone compounds
(A) with and (B) without galantamine included
23Synthesis, In vitro Acetylcholinesterase Inhibitory Activity MedPharmRes, 2017, Vol. 1, No. 1
Fig. 6. (A) 2D and and (B) 3D interactions between S17 and the active site of AChE
4. CONCLUSIONS
By applying Claisen-Schmidt condensation method, 20
chalcone derivatives were synthesized. These compounds
parameters including IR and 1H-NMR spectra. Among those
which were determined for in vitro acetylcholinesterase
inhibitory activities, six had IC50 values below 100 µM;
three had the IC50 values in the range of 100 – 250 µM and
all the rest had IC50 values above 250 µM or not detected.
Compound S17 (4’-amino-2-chlorochalcone) showed the
highest AChE inhibitory activity with IC50 value of 36.10
µM. It could be considered to use as a lead compound for the
studies on AChE inhibitory activity of chalcone compounds.
Together with the results of acetylcholinesterase inhibitory
assay, the molecular docking studies gave some elucidation
for the binding modes of chalcones to the active site of
AChE. The information could be valuable for further
investigation and would be useful in later research on the
design and synthesis new acetylcholinesterase inhibitors.
ACKNOWLEDGEMENT
This work was supported by the Vietnam’s National
Foundation for Science and Technology Development -
NAFOSTED (Grand # 106-YS.05-2015.31 to Khac-Minh Thai).
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Synthesis, In vitro Acetylcholinesterase Inhibitory Activity MedPharmRes, 2017, Vol. 1, No. 1
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